Description

Fanconi anemia, complementation group A [Source:HGNC Symbol;Acc:3582]

Gene Synonyms

FA, FA-H, FA1, FAA, FACA, FAH, FANCH

Location
About this transcript

This transcript has 43 exons, is annotated with 12 domains and features, is associated with 34859 variant alleles and maps to 1228 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
FANCA-001ENST00000389301.354511455aaENSP00000373952.3
 
Protein coding
CCDS32515H3BT53 O15360 NM_000135
NP_000126
GENCODE basic
FANCA-002ENST00000568369.146011424aaENSP00000456829.1
 
Protein coding
CCDS67099H3BSR5 H3BT53 NM_001286167
NP_001273096
GENCODE basic
FANCA-003ENST00000389302.31641297aaENSP00000373953.3
 
Protein coding
CCDS42221O15360 NM_001018112
NP_001018122
GENCODE basic
FANCA-006ENST00000563673.11694316aaENSP00000456443.1
 
Protein coding
-H3BRX3 -GENCODE basic
FANCA-201ENST00000534992.11088302aaENSP00000443675.1
 
Protein coding
-F5H8D5 -GENCODE basic
FANCA-004ENST00000543736.11000265aaENSP00000443409.1
 
Protein coding
-Q0VAP4 -GENCODE basic
FANCA-028ENST00000564475.1732240aaENSP00000454977.1
 
Protein coding
---CDS 5' incomplete
FANCA-026ENST00000567879.1713214aaENSP00000457006.1
 
Protein coding
-H3BT40 -CDS 5' incomplete
FANCA-027ENST00000561722.1696195aaENSP00000456608.1
 
Protein coding
-H3BSA3 -CDS 5' incomplete
FANCA-030ENST00000564870.1460153aaENSP00000456481.1
 
Protein coding
---CDS 5' and 3' incomplete
FANCA-021ENST00000567988.1915109aaENSP00000454217.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-010ENST00000567943.1860158aaENSP00000455941.1
 
Nonsense mediated decay
-H3BQU1 --
FANCA-012ENST00000565582.1812210aaENSP00000456722.1
 
Nonsense mediated decay
-H3BSI9 -CDS 5' incomplete
FANCA-022ENST00000561660.1762182aaENSP00000456588.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-023ENST00000568626.1727168aaENSP00000455974.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-019ENST00000563510.163351aaENSP00000456993.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-013ENST00000567621.1618125aaENSP00000456762.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-020ENST00000563318.160577aaENSP00000457970.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-011ENST00000563513.1571114aaENSP00000455946.1
 
Nonsense mediated decay
-H3BQU6 --
FANCA-016ENST00000567510.1461101aaENSP00000455969.1
 
Nonsense mediated decay
-H3BQW7 -CDS 5' incomplete
FANCA-008ENST00000567205.141363aaENSP00000457027.1
 
Nonsense mediated decay
-H3BT53 -CDS 5' incomplete
FANCA-007ENST00000566409.139541aaENSP00000457647.1
 
Nonsense mediated decay
---CDS 5' incomplete
FANCA-031ENST00000567284.2479No protein-
 
Processed transcript
----
FANCA-005ENST00000566889.12201No protein-
 
Retained intron
----
FANCA-009ENST00000305699.111430No protein-
 
Retained intron
----
FANCA-024ENST00000564969.1850No protein-
 
Retained intron
----
FANCA-014ENST00000566133.1761No protein-
 
Retained intron
----
FANCA-029ENST00000562424.1745No protein-
 
Retained intron
----
FANCA-025ENST00000568983.1726No protein-
 
Retained intron
----
FANCA-032ENST00000567883.1650No protein-
 
Retained intron
----
FANCA-017ENST00000563767.1578No protein-
 
Retained intron
----
FANCA-018ENST00000561667.1528No protein-
 
Retained intron
----
Statistics

Exons: 43, Coding exons: 43, Transcript length: 5,451 bps, Translation length: 1,455 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32515

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15360

Version

ENST00000389301.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000421927 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays