Transcript: ENST00000288221.6 ERC2-001

Description

ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:31922]

Gene Synonyms

CAST, CAST1, ELKSL, KIAA0378, SPBC110, Spc110

Location

Chromosome 3: 55,542,336-56,502,391 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 25 domains and features, is associated with 404498 variant alleles and maps to 611 oligo probes.

Gene

This transcript is a product of gene ENSG00000187672.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288221.6	ERC2-001	6138	957aa	ENSP00000288221.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46851	O15083	NM_015576.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492584.2	ERC2-006	1585	528aa	ENSP00000417280.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000460849.1	ERC2-005	3831	957aa	ENSP00000417445.1	Nonsense mediated decay	CCDS46851	O15083	-	-
ENST00000486496.1	ERC2-003	3488	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484530.1	ERC2-004	2594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473469.1	ERC2-008	968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469720.1	ERC2-002	904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466358.1	ERC2-011	689	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477381.1	ERC2-007	658	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472917.1	ERC2-016	629	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468118.1	ERC2-010	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487287.1	ERC2-014	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484857.2	ERC2-015	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 16, Transcript length: 6,138 bps, Translation length: 957 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15083

CCDS

This transcript is a member of the Human CCDS set: CCDS46851

Version

ENST00000288221.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000350884 (version 2)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000288221.6 ERC2-001

Summary