Transcript: ENST00000392151.2 CHP1-002

Description

calcineurin-like EF-hand protein 1 [Source:HGNC Symbol;Acc:17433]

Gene Synonyms

CHP, SLC9A1BP, Sid470p, p22, p24

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 21399 variant alleles and maps to 274 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334660.5	CHP1-001	3284	195aa	ENSP00000335632.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10073	Q99653	NM_007236.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560397.1	CHP1-006	568	154aa	ENSP00000454007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNG9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560965.1	CHP1-004	467	91aa	ENSP00000453392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560411.1	CHP1-003	1088	53aa	ENSP00000453375.1	Nonsense mediated decay		H0YLX1	-	-
ENST00000392151.2	CHP1-002	1000	128aa	ENSP00000440490.1	Nonsense mediated decay		F5GX29	-	-
ENST00000560784.1	CHP1-008	717	123aa	ENSP00000452772.1	Nonsense mediated decay		H0YKE7	-	-
ENST00000558351.1	CHP1-009	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560633.1	CHP1-005	594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561280.1	CHP1-007	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,000 bps, Translation length: 128 residues

Version

ENST00000392151.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000419053 (version 1)