Transcript: ENST00000398979.3 TMEM216-004

Description

transmembrane protein 216 [Source:HGNC Symbol;Acc:25018]

Gene Synonyms

CORS2, HSPC244, JBTS2, MGC13379, MKS2

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 2609 variant alleles and maps to 278 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000515837.2	TMEM216-001	1955	145aa	ENSP00000440638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53640	J3QT25 Q9P0N5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334888.5	TMEM216-201	1306	148aa	ENSP00000334844.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P0N5	NM_016499.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398979.3	TMEM216-004	908	84aa	ENSP00000381950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QT25	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541473.1	TMEM216-002	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544795.1	TMEM216-003	493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 908 bps, Translation length: 84 residues

Version

ENST00000398979.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398431 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.