Transcript: ENST00000252242.4 KRT5-001

Description

keratin 5 [Source:HGNC Symbol;Acc:6442]

Gene Synonyms

CK5, DDD, DDD1, EBS2, K5, KRT5A

Location

Chromosome 12: 52,908,359-52,914,471 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 3780 variant alleles and maps to 611 oligo probes.

Gene

This transcript is a product of gene ENSG00000186081.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252242.4	KRT5-001	2531	590aa	ENSP00000252242.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8830	B4DL32 F8VV57 P13647 Q9UEK9	NM_000424.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548409.1	KRT5-008	936	201aa	ENSP00000448767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UEK9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000549420.1	KRT5-005	611	178aa	ENSP00000447209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0C6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551188.1	KRT5-007	587	196aa	ENSP00000449783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UEK9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000546577.1	KRT5-003	542	132aa	ENSP00000449651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VV57	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551275.1	KRT5-004	539	147aa	ENSP00000448041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VU69	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552629.1	KRT5-002	2046	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549511.1	KRT5-009	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000551013.1	KRT5-006	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000547890.1	KRT5-010	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552952.1	KRT5-011	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,531 bps, Translation length: 590 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13647

CCDS

This transcript is a member of the Human CCDS set: CCDS8830

Version

ENST00000252242.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000405312 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000252242.4 KRT5-001

Summary