Transcript: ENST00000536618.1 LRCH3-201

Description

leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:HGNC Symbol;Acc:28637]

Gene Synonyms

MGC4126

Location

Chromosome 3: 197,556,499-197,612,701 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 10 domains and features, is associated with 26407 variant alleles and maps to 594 oligo probes.

Gene

This transcript is a product of gene ENSG00000186001.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000438796.2	LRCH3-001	7394	803aa	ENSP00000399751.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96II8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428136.1	LRCH3-009	3205	181aa	ENSP00000394763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000425562.2	LRCH3-006	2970	777aa	ENSP00000393579.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3V2 Q96II8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414675.2	LRCH3-003	2299	725aa	ENSP00000394965.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E0T7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334859.4	LRCH3-004	2258	712aa	ENSP00000334375.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3330	Q96II8	NM_032773.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536618.1	LRCH3-201	2235	372aa	ENSP00000439083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3V2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441090.2	LRCH3-002	2034	623aa	ENSP00000394609.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PD99	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433298.1	LRCH3-017	977	214aa	ENSP00000400164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1G3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000452660.1	LRCH3-015	681	227aa	ENSP00000395309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0J8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000443727.1	LRCH3-011	611	92aa	ENSP00000412975.1	Nonsense mediated decay		F8WFB5	-	-
ENST00000493726.1	LRCH3-012	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494069.1	LRCH3-013	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466054.1	LRCH3-021	683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466845.1	LRCH3-023	662	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471667.1	LRCH3-018	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483442.1	LRCH3-019	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461674.1	LRCH3-014	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481048.1	LRCH3-016	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473177.1	LRCH3-020	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476664.1	LRCH3-022	227	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 13, Transcript length: 2,235 bps, Translation length: 372 residues

Version

ENST00000536618.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000536618.1 LRCH3-201

Summary