Human (GRCh37.p13)
Description

patched 1 [Source:HGNC Symbol;Acc:9585]

Gene Synonyms

BCNS, HPE7, NBCCS, PTC, PTC1, PTCH, PTCH11

Location
About this transcript

This transcript has 24 exons, is annotated with 32 domains and features, is associated with 22012 variant alleles and maps to 1178 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000430669.2PTCH1-00382321381aaENSP00000410287.2
 
Protein coding
CCDS47996F8VQS6 F8VXL8 Q13635
Q6TKQ0
-GENCODE basic
ENST00000331920.6PTCH1-00180571447aaENSP00000332353.6
 
Protein coding
CCDS6714F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_000264.3GENCODE basic
ENST00000437951.1PTCH1-20380491381aaENSP00000389744.1
 
Protein coding
CCDS47996F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_001083603.1GENCODE basic
ENST00000418258.1PTCH1-20178151296aaENSP00000396135.1
 
Protein coding
CCDS43851F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_001083607.1GENCODE basic
ENST00000421141.1PTCH1-20276591296aaENSP00000399981.1
 
Protein coding
CCDS43851F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_001083605.1GENCODE basic
ENST00000429896.2PTCH1-00265631296aaENSP00000414823.2
 
Protein coding
CCDS43851F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_001083606.1GENCODE basic
ENST00000375274.2PTCH1-00747201446aaENSP00000364423.2
 
Protein coding
CCDS47995A3KBF6 F8VQS6 F8VXL8
Q13635 Q6TKQ0
-GENCODE basic
ENST00000468211.2PTCH1-0061254183aaENSP00000449745.1
 
Protein coding
F8VQS6 Q13635 -GENCODE basic
ENST00000375271.4PTCH1-0051058352aaENSP00000364420.4
 
Protein coding
H0Y3B8 Q3LFT4 -CDS 5' and 3' incomplete
ENST00000553011.1PTCH1-0121037174aaENSP00000447797.1
 
Protein coding
F8VQS6 Q13635 -CDS 3' incomplete
ENST00000547672.1PTCH1-009881174aaENSP00000447878.1
 
Protein coding
F8VQS6 Q13635 -CDS 3' incomplete
ENST00000546820.1PTCH1-010864174aaENSP00000448843.1
 
Protein coding
F8VQS6 Q13635 -CDS 3' incomplete
ENST00000551845.1PTCH1-011809174aaENSP00000447008.1
 
Protein coding
F8VQS6 Q13635 -CDS 3' incomplete
ENST00000548420.1PTCH1-01955366aaENSP00000449078.1
 
Protein coding
F8VXL8 -CDS 3' incomplete
ENST00000551630.1PTCH1-02053992aaENSP00000450131.1
 
Protein coding
F8VQS6 -CDS 3' incomplete
ENST00000375290.2PTCH1-01510631486aaENSP00000364439.2
 
Nonsense mediated decay
F8VXL8 H3BLX7 Q3LG18
Q6TKQ0
-CDS 5' incomplete
ENST00000550914.2PTCH1-01463079aaENSP00000450047.1
 
Nonsense mediated decay
F8VPA3 --
ENST00000551623.1PTCH1-01636616aaENSP00000447242.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000548379.1PTCH1-022548No protein-
 
Processed transcript
---
ENST00000553256.1PTCH1-021537No protein-
 
Processed transcript
---
ENST00000547615.1PTCH1-024525No protein-
 
Processed transcript
---
ENST00000548945.2PTCH1-013243No protein-
 
Processed transcript
---
ENST00000551425.1PTCH1-008241No protein-
 
Processed transcript
---
ENST00000546744.1PTCH1-0184389No protein-
 
Retained intron
---
ENST00000550136.1PTCH1-0172388No protein-
 
Retained intron
---
ENST00000549678.1PTCH1-023578No protein-
 
Retained intron
---
ENST00000488809.2PTCH1-004301No protein-
 
Retained intron
---
Statistics

Exons: 24, Coding exons: 23, Transcript length: 8,057 bps, Translation length: 1,447 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13635

CCDS

This transcript is a member of the Human CCDS set: CCDS6714

Version

ENST00000331920.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000053229 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.