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Human (GRCh37.p13)
Description

patched 1 [Source:HGNC Symbol;Acc:9585]

Gene Synonyms

BCNS, HPE7, NBCCS, PTC, PTC1, PTCH, PTCH11

Location
About this transcript

This transcript has 24 exons, is annotated with 32 domains and features, is associated with 20416 variant alleles and maps to 1177 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
PTCH1-003ENST00000430669.282321381aaENSP00000410287.2
 
Protein coding
CCDS47996F8VQS6 F8VXL8 Q13635
Q6TKQ0
-GENCODE basic
PTCH1-001ENST00000331920.680571447aaENSP00000332353.6
 
Protein coding
CCDS6714F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_000264
NP_000255
GENCODE basic
PTCH1-203ENST00000437951.180491381aaENSP00000389744.1
 
Protein coding
CCDS47996F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_001083602
NM_001083603
NP_001077071
NP_001077072
GENCODE basic
PTCH1-201ENST00000418258.178151296aaENSP00000396135.1
 
Protein coding
CCDS43851F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_001083607
NP_001077076
GENCODE basic
PTCH1-202ENST00000421141.176591296aaENSP00000399981.1
 
Protein coding
CCDS43851F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_001083604
NM_001083605
NP_001077073
NP_001077074
GENCODE basic
PTCH1-002ENST00000429896.265631296aaENSP00000414823.2
 
Protein coding
CCDS43851F8VQS6 F8VXL8 Q13635
Q6TKQ0
NM_001083606
NP_001077075
GENCODE basic
PTCH1-007ENST00000375274.247201446aaENSP00000364423.2
 
Protein coding
CCDS47995A3KBF6 F8VQS6 F8VXL8
Q13635 Q6TKQ0
-GENCODE basic
PTCH1-006ENST00000468211.21254183aaENSP00000449745.1
 
Protein coding
-F8VQS6 Q13635 -GENCODE basic
PTCH1-005ENST00000375271.41058352aaENSP00000364420.4
 
Protein coding
-H0Y3B8 Q3LFT4 -CDS 5' and 3' incomplete
PTCH1-012ENST00000553011.11037174aaENSP00000447797.1
 
Protein coding
-F8VQS6 Q13635 -CDS 3' incomplete
PTCH1-009ENST00000547672.1881174aaENSP00000447878.1
 
Protein coding
-F8VQS6 Q13635 -CDS 3' incomplete
PTCH1-010ENST00000546820.1864174aaENSP00000448843.1
 
Protein coding
-F8VQS6 Q13635 -CDS 3' incomplete
PTCH1-011ENST00000551845.1809174aaENSP00000447008.1
 
Protein coding
-F8VQS6 Q13635 -CDS 3' incomplete
PTCH1-019ENST00000548420.155366aaENSP00000449078.1
 
Protein coding
-F8VXL8 -CDS 3' incomplete
PTCH1-020ENST00000551630.153992aaENSP00000450131.1
 
Protein coding
-F8VQS6 -CDS 3' incomplete
PTCH1-015ENST00000375290.210631486aaENSP00000364439.2
 
Nonsense mediated decay
-F8VXL8 H3BLX7 Q3LG18
Q6TKQ0
-CDS 5' incomplete
PTCH1-014ENST00000550914.263079aaENSP00000450047.1
 
Nonsense mediated decay
-F8VPA3 --
PTCH1-016ENST00000551623.136616aaENSP00000447242.1
 
Nonsense mediated decay
---CDS 5' incomplete
PTCH1-022ENST00000548379.1548No protein-
 
Processed transcript
----
PTCH1-021ENST00000553256.1537No protein-
 
Processed transcript
----
PTCH1-024ENST00000547615.1525No protein-
 
Processed transcript
----
PTCH1-013ENST00000548945.2243No protein-
 
Processed transcript
----
PTCH1-008ENST00000551425.1241No protein-
 
Processed transcript
----
PTCH1-018ENST00000546744.14389No protein-
 
Retained intron
----
PTCH1-017ENST00000550136.12388No protein-
 
Retained intron
----
PTCH1-023ENST00000549678.1578No protein-
 
Retained intron
----
PTCH1-004ENST00000488809.2301No protein-
 
Retained intron
----
Statistics

Exons: 24, Coding exons: 23, Transcript length: 8,057 bps, Translation length: 1,447 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6714

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13635

Version

ENST00000331920.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000053229 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays