Transcript: ENST00000331483.4 P4HB-001

Description

prolyl 4-hydroxylase, beta polypeptide [Source:HGNC Symbol;Acc:8548]

Gene Synonyms

DSI, ERBA2L, GIT, P4Hbeta, PDI, PDIA1, PHDB, PO4DB, PO4HB, PROHB

Location

Chromosome 17: 79,801,035-79,818,570 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 26 domains and features, is associated with 9535 variant alleles and maps to 906 oligo probes.

Gene

This transcript is a product of gene ENSG00000185624.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331483.4	P4HB-001	2603	508aa	ENSP00000327801.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11787	B3KTQ9 P07237	NM_000918.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415593.1	P4HB-002	1669	274aa	ENSP00000388117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KTQ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000439918.2	P4HB-021	1502	464aa	ENSP00000388374.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KTQ9 H7BZ94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576380.1	P4HB-026	943	200aa	ENSP00000460285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L398	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000573778.2	P4HB-022	688	208aa	ENSP00000460088.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L312	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576541.1	P4HB-027	571	188aa	ENSP00000460741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3U6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574914.1	P4HB-019	571	156aa	ENSP00000460612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3P5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576052.1	P4HB-024	562	166aa	ENSP00000461791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3NI03	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571617.1	P4HB-025	505	148aa	ENSP00000458300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0S0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576390.1	P4HB-023	439	106aa	ENSP00000461718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L514	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570907.1	P4HB-029	353	117aa	ENSP00000461362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4M2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000575069.1	P4HB-014	2453	54aa	ENSP00000459211.1	Nonsense mediated decay		I3L1Y5	-	-
ENST00000472244.1	P4HB-013	858	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467086.1	P4HB-004	785	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471535.1	P4HB-003	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477607.2	P4HB-006	1110	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574007.1	P4HB-028	1053	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473021.1	P4HB-012	914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466567.2	P4HB-005	872	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478034.1	P4HB-007	811	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476482.1	P4HB-009	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484286.1	P4HB-008	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000571507.1	P4HB-030	493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474712.1	P4HB-010	390	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,603 bps, Translation length: 508 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P07237

CCDS

This transcript is a member of the Human CCDS set: CCDS11787

Version

ENST00000331483.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317250 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000331483.4 P4HB-001

Summary