Transcript: ENST00000557963.1 ALDH1A3-006

Description

aldehyde dehydrogenase 1 family, member A3 [Source:HGNC Symbol;Acc:409]

Gene Synonyms

ALDH1A6, ALDH6, MCOP8, RALDH3

Location

Chromosome 15: 101,420,044-101,421,713 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 2 domains and features, is associated with 936 variant alleles and maps to 73 oligo probes.

Gene

This transcript is a product of gene ENSG00000184254.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329841.5	ALDH1A3-001	3924	512aa	ENSP00000332256.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10389	P47895	NM_000693.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346623.6	ALDH1A3-004	3104	405aa	ENSP00000343294.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y2X5 Q7Z3A2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557963.1	ALDH1A3-006	1670	102aa	ENSP00000453328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLT1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561338.1	ALDH1A3-007	571	144aa	ENSP00000452789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKF9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558033.1	ALDH1A3-008	713	141aa	ENSP00000454107.1	Nonsense mediated decay		H0YNQ3	-	-
ENST00000560555.1	ALDH1A3-003	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558869.1	ALDH1A3-009	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,670 bps, Translation length: 102 residues

Version

ENST00000557963.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000416655 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000557963.1 ALDH1A3-006

Summary