Transcript: ENST00000454499.1 TMPRSS2-008

Description

transmembrane protease, serine 2 [Source:HGNC Symbol;Acc:11876]

Gene Synonyms

PP9284, PRSS10

Location

Chromosome 21: 42,839,661-42,903,043 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 25 domains and features, is associated with 36561 variant alleles and maps to 383 oligo probes.

Gene

This transcript is a product of gene ENSG00000184012.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398585.3	TMPRSS2-201	3240	529aa	ENSP00000381588.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54486	C9JB05 C9JKZ3 O15393	NM_001135099.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000332149.5	TMPRSS2-001	3205	492aa	ENSP00000330330.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33564	C9JB05 C9JKZ3 O15393	NM_005656.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454499.1	TMPRSS2-008	1901	489aa	ENSP00000389006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JB05 C9JKZ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000458356.1	TMPRSS2-009	1701	492aa	ENSP00000391216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33564	C9JB05 C9JKZ3 O15393	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424093.1	TMPRSS2-003	726	219aa	ENSP00000397846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5Y1 C9JB05	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455813.1	TMPRSS2-010	454	79aa	ENSP00000391784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JB05	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497881.1	TMPRSS2-002	1708	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463138.1	TMPRSS2-004	217	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488556.1	TMPRSS2-006	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469395.1	TMPRSS2-005	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489201.1	TMPRSS2-011	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 1,901 bps, Translation length: 489 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000454499.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000339861 (version 4)

Favourite species

All species

Recent locations

Transcript: ENST00000454499.1 TMPRSS2-008

Summary