Transcript: ENST00000333083.7 PP2D1-002

Description

protein phosphatase 2C-like domain containing 1 [Source:HGNC Symbol;Acc:28406]

Gene Synonyms

C3orf48, FLJ25449

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 14192 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389050.4	PP2D1-001	2151	630aa	ENSP00000373702.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58817	A8MPX8	NM_001252657.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333083.7	PP2D1-002	1602	376aa	ENSP00000331295.7	Nonsense mediated decay		A8MPX8 Q2M2Y9	-	-
ENST00000461033.1	PP2D1-003	1330	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,602 bps, Translation length: 376 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A8MPX8

Version

ENST00000333083.7

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000339834 (version 1)