Transcript: ENST00000381497.2 NPIPA7-001

Description

Protein PKD1P1 [Source:UniProtKB/TrEMBL;Acc:H0YEP2]

Gene Synonyms

HG1, LCR16a9, NPIP, NPIPA3, NPIPA5, NPIPA8, PKD1P1, morpheus

Location

Chromosome 16: 16,425,734-16,444,447 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 5 domains and features, is associated with 4037 variant alleles and maps to 3105 oligo probes.

Gene

This transcript is a product of gene ENSG00000183889.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000381497.2	NPIPA7-001	1552	369aa	ENSP00000370908.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NRE7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524823.2	NPIPA7-002	1141	270aa	ENSP00000435610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4DPK5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000331436.4	NPIPA7-201	1129	369aa	ENSP00000330634.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NRE7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541593.1	NPIPA7-202	699	232aa	ENSP00000441983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YEP2 Q0P618	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000527703.1	NPIPA7-004	470	114aa	ENSP00000436257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YEP2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000537112.1	NPIPA7-005	4514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000536260.1	NPIPA7-010	2519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000538085.1	NPIPA7-007	664	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000535961.1	NPIPA7-008	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000540039.1	NPIPA7-011	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000537085.1	NPIPA7-006	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000534258.1	NPIPA7-003	621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000283050.7	NPIPA7-009	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 1,552 bps, Translation length: 369 residues

Version

ENST00000381497.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000257766 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381497.2 NPIPA7-001

Summary