Transcript: ENST00000568546.1 TBL3-001

Description

transducin (beta)-like 3 [Source:HGNC Symbol;Acc:11587]

Gene Synonyms

SAZD, UTP13

Location

About this transcript

This transcript has 22 exons, is annotated with 49 domains and features, is associated with 7689 variant alleles and maps to 1015 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000568546.1	TBL3-001	6803	808aa	ENSP00000454836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10453	A0JLS5 Q12788	NM_006453.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000332704.5	TBL3-004	2091	697aa	ENSP00000331815.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000561907.1	TBL3-006	518	77aa	ENSP00000454735.1	Nonsense mediated decay		H3BN88	-	-
ENST00000569628.1	TBL3-003	2594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567615.1	TBL3-009	1047	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564171.1	TBL3-008	917	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569792.1	TBL3-007	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 6,803 bps, Translation length: 808 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12788

CCDS

This transcript is a member of the Human CCDS set: CCDS10453

Version

ENST00000568546.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250615 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.