Transcript: ENST00000319637.6 EPHA10-001

Description

EPH receptor A10 [Source:HGNC Symbol;Acc:19987]

Gene Synonyms

FLJ16103, FLJ33655

Location

Chromosome 1: 38,225,944-38,230,805 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 2612 variant alleles and maps to 210 oligo probes.

Gene

This transcript is a product of gene ENSG00000183317.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373048.4	EPHA10-003	5425	1008aa	ENSP00000362139.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41305	Q5JZY3	NM_001099439.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427468.2	EPHA10-202	3461	1014aa	ENSP00000397746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540011.1	EPHA10-203	2332	155aa	ENSP00000441822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330210.7	EPHA10-201	2258	543aa	ENSP00000330379.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EML7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319637.6	EPHA10-001	2050	295aa	ENSP00000316395.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS425	Q5JZY3	NM_173641.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437645.1	EPHA10-005	2333	218aa	ENSP00000432693.1	Nonsense mediated decay		F5GWI2 H0YD12	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000432874.3	EPHA10-006	2096	217aa	ENSP00000436425.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534097.1	EPHA10-008	1944	392aa	ENSP00000431389.1	Nonsense mediated decay		H0YCC9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525749.1	EPHA10-009	551	92aa	ENSP00000436288.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000446149.2	EPHA10-002	2000	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000444950.1	EPHA10-007	421	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000453577.1	EPHA10-004	364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,050 bps, Translation length: 295 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JZY3

CCDS

This transcript is a member of the Human CCDS set: CCDS425

Version

ENST00000319637.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000012500 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000319637.6 EPHA10-001

Summary