Transcript: ENST00000589419.1 CCBE1-004

Description

collagen and calcium binding EGF domains 1 [Source:HGNC Symbol;Acc:29426]

Gene Synonyms

FLJ30681, KIAA1983

Location

About this transcript

This transcript has 6 exons, is associated with 107169 variant alleles and maps to 110 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000439986.4	CCBE1-001	6227	406aa	ENSP00000404464.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32838	K7EQ81 Q6UXH8	NM_133459.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398179.2	CCBE1-201	1569	135aa	ENSP00000381241.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6UXH8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589419.1	CCBE1-004	587	46aa	ENSP00000467710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQ81	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589116.1	CCBE1-002	1691	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 587 bps, Translation length: 46 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000589419.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000449688 (version 1)