Transcript: ENST00000594338.1 RUVBL2-004

Description

RuvB-like AAA ATPase 2 [Source:HGNC Symbol;Acc:10475]

Gene Synonyms

ECP51, INO80J, REPTIN, RVB2, Reptin52, TIH2, TIP48, TIP49B, TIP49b

Location

Chromosome 19: 49,502,576-49,519,151 forward strand.

About this transcript

This transcript has 13 exons, is associated with 8395 variant alleles and maps to 463 oligo probes.

Gene

This transcript is a product of gene ENSG00000183207.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000413176.2	RUVBL2-201	2488	418aa	ENSP00000413890.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KQ59 M0QXI6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595090.1	RUVBL2-001	2009	463aa	ENSP00000473172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42588	B3KQ59 M0QXI6 Q9Y230	NM_006666.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601968.1	RUVBL2-002	1641	354aa	ENSP00000471524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXI6 M0R0Y3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596837.1	RUVBL2-007	682	109aa	ENSP00000469189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXI6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000596247.1	RUVBL2-005	1563	50aa	ENSP00000471538.1	Nonsense mediated decay		M0R0Z0	-	-
ENST00000221413.6	RUVBL2-006	1478	259aa	ENSP00000221413.6	Nonsense mediated decay		M0QXI6	-	-
ENST00000593570.1	RUVBL2-008	813	39aa	ENSP00000469488.1	Nonsense mediated decay		M0QXZ7	-	-
ENST00000595811.1	RUVBL2-010	572	44aa	ENSP00000469760.1	Nonsense mediated decay		M0QYD8	-	-
ENST00000598768.1	RUVBL2-011	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000594338.1	RUVBL2-004	1853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594017.1	RUVBL2-003	959	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000595002.1	RUVBL2-009	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 0, Transcript length: 1,853 bps,

Version

ENST00000594338.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000466244 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000594338.1 RUVBL2-004

Summary