Transcript: ENST00000328957.8 GALNT9-009

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9) [Source:HGNC Symbol;Acc:4131]

Gene Synonyms

GALNAC-T9, GALNACT9

Location

Chromosome 12: 132,681,054-132,905,789 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 73076 variant alleles and maps to 430 oligo probes.

Gene

This transcript is a product of gene ENSG00000182870.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328957.8	GALNT9-009	2410	603aa	ENSP00000329846.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KP58 F5H317 F5H557 J3KNN1	NM_001122636.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411988.2	GALNT9-006	1727	376aa	ENSP00000394446.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNR7 F5H317 F5H557	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000535228.1	GALNT9-201	1727	354aa	ENSP00000439745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNR7 F5H317 F5H557	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397325.2	GALNT9-001	1720	237aa	ENSP00000380488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41866	F5H317 F5H557 Q9HCQ5	NM_021808.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541995.1	GALNT9-002	1001	237aa	ENSP00000440544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41866	F5H317 F5H557 Q9HCQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538356.1	GALNT9-004	897	96aa	ENSP00000444709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H317 F5H557	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542942.1	GALNT9-005	624	54aa	ENSP00000438221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H317	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535208.1	GALNT9-008	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000424720.2	GALNT9-010	1693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540493.1	GALNT9-007	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,410 bps, Translation length: 603 residues

Version

ENST00000328957.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000402967 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000328957.8 GALNT9-009

Summary