Transcript: ENST00000540499.2 IDH2-004

Description

isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:HGNC Symbol;Acc:5383]

Gene Synonyms

D2HGA2, ICD-M, IDH, IDHM, IDP, IDPM, mNADP-IDH

Location

About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 9253 variant alleles and maps to 329 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330062.3	IDH2-001	2694	452aa	ENSP00000331897.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10359	B4DFL2 B4DSZ6 H0YLL5 P48735	NM_002168.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540499.2	IDH2-004	1453	400aa	ENSP00000446147.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFL2 B4DSZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539790.1	IDH2-201	1449	322aa	ENSP00000438457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559482.1	IDH2-002	1278	312aa	ENSP00000453016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YL11 H0YLL5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560061.1	IDH2-003	1449	38aa	ENSP00000453254.1	Nonsense mediated decay		H0YLL5	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,453 bps, Translation length: 400 residues

Version

ENST00000540499.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000417509 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.