Transcript: ENST00000560708.1 MRPS11-004

Description

mitochondrial ribosomal protein S11 [Source:HGNC Symbol;Acc:14050]

Gene Synonyms

FLJ22512, FLJ23406, HCC-2, RPMS11

Location

Chromosome 15: 89,010,684-89,021,482 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 4840 variant alleles and maps to 343 oligo probes.

Gene

This transcript is a product of gene ENSG00000181991.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325844.4	MRPS11-001	1862	194aa	ENSP00000317376.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10342	P82912	NM_022839.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353598.6	MRPS11-002	766	161aa	ENSP00000318054.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10343	P82912	NM_176805.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560708.1	MRPS11-004	1060	118aa	ENSP00000453116.1	Nonsense mediated decay		H0YL99	-	-
ENST00000557974.1	MRPS11-007	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559323.1	MRPS11-008	2002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558406.1	MRPS11-010	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558548.1	MRPS11-006	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561262.1	MRPS11-003	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560850.1	MRPS11-009	458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559125.1	MRPS11-011	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559557.1	MRPS11-005	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,060 bps, Translation length: 118 residues

Version

ENST00000560708.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415290 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000560708.1 MRPS11-004

Summary