Transcript: ENST00000574158.1 POLR2A-011

Description

polymerase (RNA) II (DNA directed) polypeptide A, 220kDa [Source:HGNC Symbol;Acc:9187]

Gene Synonyms

POLR2, POLRA, RPB1, RPBh1, RPO2, RPOL2, RpIILS, hRPB220, hsRPB1

Location

Chromosome 17: 7,406,720-7,407,275 forward strand.

About this transcript

This transcript has 2 exons, is associated with 313 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSG00000181222.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322644.6	POLR2A-001	6749	1970aa	ENSP00000314949.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32548	P24928	NM_000937.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572844.1	POLR2A-002	2083	566aa	ENSP00000461879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NX41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575547.1	POLR2A-006	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573603.1	POLR2A-009	648	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576553.1	POLR2A-010	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576718.1	POLR2A-007	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576952.1	POLR2A-005	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574158.1	POLR2A-011	461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576114.1	POLR2A-008	245	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 461 bps,

Version

ENST00000574158.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000437974 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000574158.1 POLR2A-011

Summary