Transcript: ENST00000596956.1 MUC16-005

Description

mucin 16, cell surface associated [Source:HGNC Symbol;Acc:15582]

Gene Synonyms

CA125, FLJ14303

Location

About this transcript

This transcript has 4 exons, is associated with 1738 variant alleles and maps to 83 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397910.4	MUC16-001	43816	14507aa	ENSP00000381008.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54212	B5ME49 F8WE81	NM_024690.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599436.1	MUC16-004	4079	1330aa	ENSP00000472781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000380951.5	MUC16-201	3557	1148aa	ENSP00000370338.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WE81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601404.1	MUC16-002	4078	1224aa	ENSP00000470885.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000596768.1	MUC16-003	2888	670aa	ENSP00000472883.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000596956.1	MUC16-005	352	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 352 bps,

Version

ENST00000596956.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460024 (version 1)