Transcript: ENST00000321935.6 FCRL6-001

Description

Fc receptor-like 6 [Source:HGNC Symbol;Acc:31910]

Gene Synonyms

FCRH6, FLJ16056, FcRH6, IFGP6

Location

Chromosome 1: 159,770,302-159,786,041 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 21 domains and features, is associated with 7636 variant alleles and maps to 366 oligo probes.

Gene

This transcript is a product of gene ENSG00000181036.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000321935.6	FCRL6-001	1997	413aa	ENSP00000320625.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60312	Q6DN72	NM_001284217.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339348.5	FCRL6-004	1422	397aa	ENSP00000340949.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6DN72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368106.3	FCRL6-003	1306	434aa	ENSP00000357086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30912	Q6DN72	NM_001004310.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392235.3	FCRL6-002	947	311aa	ENSP00000376068.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6DN72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536257.1	FCRL6-007	560	158aa	ENSP00000440712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYB3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540741.1	FCRL6-005	1226	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541729.1	FCRL6-006	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,997 bps, Translation length: 413 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DN72

CCDS

This transcript is a member of the Human CCDS set: CCDS60312

Version

ENST00000321935.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs4301626, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HAPMAP-LWK, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-CHD.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085593 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000321935.6 FCRL6-001

Summary