Transcript: ENST00000325411.5 SLC47A2-002

Description

solute carrier family 47 (multidrug and toxin extrusion), member 2 [Source:HGNC Symbol;Acc:26439]

Gene Synonyms

FLJ31196, MATE2, MATE2-B, MATE2-K, MATE2K

Location

Chromosome 17: 19,581,601-19,619,919 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 22 domains and features, is associated with 16562 variant alleles and maps to 503 oligo probes.

Gene

This transcript is a product of gene ENSG00000180638.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000350657.5	SLC47A2-001	2285	580aa	ENSP00000338084.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58530	Q86VL8	NM_001256663.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000325411.5	SLC47A2-002	2258	602aa	ENSP00000326671.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11211	Q86VL8	NM_152908.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433844.2	SLC47A2-008	1264	363aa	ENSP00000391848.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574239.1	SLC47A2-010	1962	219aa	ENSP00000458694.1	Nonsense mediated decay		Q86VL8	-	-
ENST00000463318.1	SLC47A2-003	2742	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000456947.3	SLC47A2-013	3114	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467379.1	SLC47A2-006	2538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467609.1	SLC47A2-005	2201	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483510.2	SLC47A2-007	991	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574220.1	SLC47A2-011	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,258 bps, Translation length: 602 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86VL8

CCDS

This transcript is a member of the Human CCDS set: CCDS11211

Version

ENST00000325411.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000132242 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000325411.5 SLC47A2-002

Summary