Transcript: ENST00000346246.5 ARID3B-001

Description

AT rich interactive domain 3B (BRIGHT-like) [Source:HGNC Symbol;Acc:14350]

Gene Synonyms

BDP, DRIL2

Location

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 25043 variant alleles and maps to 582 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000346246.5	ARID3B-001	4271	560aa	ENSP00000343126.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10264	H3BQ92 Q8IVW6	NM_006465.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566147.1	ARID3B-004	581	138aa	ENSP00000455668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQ92	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563567.1	ARID3B-006	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569680.1	ARID3B-002	2654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566468.1	ARID3B-005	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 4,271 bps, Translation length: 560 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IVW6

CCDS

This transcript is a member of the Human CCDS set: CCDS10264

Version

ENST00000346246.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000280688 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.