Transcript: ENST00000318887.3 C3orf38-001

Description

chromosome 3 open reading frame 38 [Source:HGNC Symbol;Acc:28384]

Gene Synonyms

MGC26717

Location

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 3805 variant alleles and maps to 462 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318887.3	C3orf38-001	2633	329aa	ENSP00000322469.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2921	D3DU39 Q5JPI3	NM_173824.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486971.1	C3orf38-003	1259	140aa	ENSP00000418774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PFZ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464919.1	C3orf38-002	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485219.1	C3orf38-004	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,633 bps, Translation length: 329 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JPI3

CCDS

This transcript is a member of the Human CCDS set: CCDS2921

Version

ENST00000318887.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000341513 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.