Transcript: ENST00000458580.2 EXD1-002

Description

exonuclease 3'-5' domain containing 1 [Source:HGNC Symbol;Acc:28507]

Gene Synonyms

EXDL1, MGC33637

Location

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 22385 variant alleles and maps to 342 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314992.5	EXD1-001	2942	514aa	ENSP00000321029.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10072	Q8NHP7	NM_152596.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458580.2	EXD1-002	2177	572aa	ENSP00000415056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66738	B7Z839	NM_001286441.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558396.1	EXD1-004	483	55aa	ENSP00000452678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK66	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559743.1	EXD1-005	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558881.1	EXD1-003	2293	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,177 bps, Translation length: 572 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS66738

Version

ENST00000458580.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000418943 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.