Transcript: ENST00000313511.3 TUFM-001

Description

Tu translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:12420]

Gene Synonyms

COXPD4, EF-TuMT, EFTU, EFTu, P43

Location

About this transcript

This transcript has 10 exons, is annotated with 22 domains and features, is associated with 2285 variant alleles and maps to 674 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313511.3	TUFM-001	2071	455aa	ENSP00000322439.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10642	P49411	NM_003321.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565012.1	TUFM-004	966	101aa	ENSP00000455007.1	Nonsense mediated decay		H3BNU3	-	-
ENST00000569217.1	TUFM-002	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561644.1	TUFM-003	294	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,071 bps, Translation length: 455 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49411

CCDS

This transcript is a member of the Human CCDS set: CCDS10642

Version

ENST00000313511.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000214140 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.