Transcript: ENST00000377084.2 SLITRK1-001

Description

SLIT and NTRK-like family, member 1 [Source:HGNC Symbol;Acc:20297]

Gene Synonyms

KIAA1910, LRRC12, TTM

Location

About this transcript

This transcript has 1 exon, is annotated with 39 domains and features, is associated with 3486 variant alleles and maps to 293 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377084.2	SLITRK1-001	5185	696aa	ENSP00000366288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9464	Q96PX8	NM_052910.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 5,185 bps, Translation length: 696 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PX8

CCDS

This transcript is a member of the Human CCDS set: CCDS9464

Version

ENST00000377084.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000045396 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.