Transcript: ENST00000534774.1 DDX10-004

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Source:HGNC Symbol;Acc:2735]

Gene Synonyms

HRH-J8

Location

Chromosome 11: 108,535,809-108,546,521 forward strand.

About this transcript

This transcript has 3 exons, is associated with 4587 variant alleles and maps to 77 oligo probes.

Gene

This transcript is a product of gene ENSG00000178105.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000526794.1	DDX10-003	6707	835aa	ENSP00000432032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIF2 Q59EC7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322536.3	DDX10-001	3264	875aa	ENSP00000314348.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8342	Q13206	NM_004398.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534221.1	DDX10-009	870	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524979.1	DDX10-008	794	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534439.1	DDX10-005	438	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530116.1	DDX10-007	435	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534774.1	DDX10-004	518	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533198.1	DDX10-006	372	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 518 bps,

Version

ENST00000534774.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000390345 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000534774.1 DDX10-004

Summary