Transcript: ENST00000413230.2 DPY19L2-003

Description

dpy-19-like 2 (C. elegans) [Source:HGNC Symbol;Acc:19414]

Gene Synonyms

FLJ32949, SPATA34, SPGF9

Location

Chromosome 12: 63,953,976-63,977,942 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 8878 variant alleles and maps to 388 oligo probes.

Gene

This transcript is a product of gene ENSG00000177990.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324472.4	DPY19L2-001	4060	758aa	ENSP00000315988.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31851	B4E191 F5H1L7 F5H4G6 Q6NUT2	NM_173812.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413230.2	DPY19L2-003	1339	205aa	ENSP00000439794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E191	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541083.1	DPY19L2-007	603	124aa	ENSP00000443126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5T7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542209.1	DPY19L2-005	505	90aa	ENSP00000444932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4G6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538147.1	DPY19L2-006	491	47aa	ENSP00000439567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1L7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000306389.7	DPY19L2-002	1549	142aa	ENSP00000445878.1	Nonsense mediated decay		F5H0W1 F5H4G6	-	-
ENST00000439061.2	DPY19L2-008	1173	149aa	ENSP00000437474.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000536494.1	DPY19L2-004	882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541911.1	DPY19L2-009	850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,339 bps, Translation length: 205 residues

Version

ENST00000413230.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400782 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000413230.2 DPY19L2-003

Summary