Transcript: ENST00000324472.4 DPY19L2-001

Description

dpy-19-like 2 (C. elegans) [Source:HGNC Symbol;Acc:19414]

Gene Synonyms

FLJ32949, SPATA34, SPGF9

Location

Chromosome 12: 63,952,693-64,062,357 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 15 domains and features, is associated with 44983 variant alleles and maps to 1368 oligo probes.

Gene

This transcript is a product of gene ENSG00000177990.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324472.4	DPY19L2-001	4060	758aa	ENSP00000315988.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31851	B4E191 F5H1L7 F5H4G6 Q6NUT2	NM_173812.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413230.2	DPY19L2-003	1339	205aa	ENSP00000439794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E191	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541083.1	DPY19L2-007	603	124aa	ENSP00000443126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5T7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542209.1	DPY19L2-005	505	90aa	ENSP00000444932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4G6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538147.1	DPY19L2-006	491	47aa	ENSP00000439567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1L7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000306389.7	DPY19L2-002	1549	142aa	ENSP00000445878.1	Nonsense mediated decay		F5H0W1 F5H4G6	-	-
ENST00000439061.2	DPY19L2-008	1173	149aa	ENSP00000437474.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000536494.1	DPY19L2-004	882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541911.1	DPY19L2-009	850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 4,060 bps, Translation length: 758 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NUT2

CCDS

This transcript is a member of the Human CCDS set: CCDS31851

Version

ENST00000324472.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000400689 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000324472.4 DPY19L2-001

Summary