Transcript: ENST00000313766.5 FAM20C-001

Description

family with sequence similarity 20, member C [Source:HGNC Symbol;Acc:22140]

Gene Synonyms

DKFZp547D065, DMP-4, DMP4, GEF-CK, IMAGE:4942737, RNS

Location

About this transcript

This transcript has 10 exons, is annotated with 9 domains and features, is associated with 36388 variant alleles and maps to 381 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313766.5	FAM20C-001	2751	584aa	ENSP00000322323.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47522	Q8IXL6	NM_020223.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471328.1	FAM20C-002	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477004.1	FAM20C-003	344	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515795.1	FAM20C-004	2177	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512382.1	FAM20C-005	1018	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,751 bps, Translation length: 584 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IXL6

CCDS

This transcript is a member of the Human CCDS set: CCDS47522

Version

ENST00000313766.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000322476 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.