Transcript: ENST00000535270.1 POLE-004

Description

polymerase (DNA directed), epsilon, catalytic subunit [Source:HGNC Symbol;Acc:9177]

Gene Synonyms

CRCS12, FILS, POLE1

Location

Chromosome 12: 133,201,276-133,263,914 reverse strand.

About this transcript

This transcript has 48 exons, is annotated with 16 domains and features, is associated with 44296 variant alleles and maps to 962 oligo probes.

Gene

This transcript is a product of gene ENSG00000177084.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320574.5	POLE-001	7840	2286aa	ENSP00000322570.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9278	D3DXI9 F5H0H8 F5H3W5 F5H5Q5 F5H7H6 Q07864 Q8WU23 Q96IE1 Q9UNE8	NM_006231.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535270.1	POLE-004	6800	2259aa	ENSP00000445753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DXI9 F5H0H8 F5H1D6 F5H3W5 F5H5Q5 F5H7H6 Q8WU23 Q96IE1 Q9UNE8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539006.1	POLE-006	3575	1163aa	ENSP00000442519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H8 F5H3W5 F5H5Q5 F5H7H6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536445.1	POLE-014	2334	307aa	ENSP00000439052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H8 F5H3W5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535934.1	POLE-010	1561	180aa	ENSP00000443213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5Q5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503265.3	POLE-016	1501	123aa	ENSP00000439842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0H8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000537064.1	POLE-002	8011	310aa	ENSP00000442578.1	Nonsense mediated decay		F5H7E4 Q9UNE8	-	-
ENST00000434528.3	POLE-027	808	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544870.1	POLE-025	659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000441786.2	POLE-015	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538196.1	POLE-026	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539618.1	POLE-008	299	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544692.1	POLE-003	2221	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541627.1	POLE-007	2096	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541213.1	POLE-020	1675	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534922.1	POLE-024	1660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540987.1	POLE-017	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544414.1	POLE-022	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000416953.2	POLE-021	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543516.1	POLE-018	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542362.1	POLE-019	508	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000539215.1	POLE-012	483	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545015.1	POLE-013	366	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000539357.1	POLE-009	364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 48, Coding exons: 48, Transcript length: 6,800 bps, Translation length: 2,259 residues

Version

ENST00000535270.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397692 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000535270.1 POLE-004

Summary