Transcript: ENST00000502434.1 RUFY1-012

Description

RUN and FYVE domain containing 1 [Source:HGNC Symbol;Acc:19760]

Gene Synonyms

FLJ22251, RABIP4, ZFYVE12

Location

Chromosome 5: 179,004,114-179,034,629 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 10342 variant alleles and maps to 258 oligo probes.

Gene

This transcript is a product of gene ENSG00000176783.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377001.2	RUFY1-201	2771	412aa	ENSP00000366200.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96T51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319449.4	RUFY1-001	2646	708aa	ENSP00000325594.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4445	Q96T51	NM_025158.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437570.2	RUFY1-002	2642	600aa	ENSP00000390025.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34312	Q96T51	NM_001040451.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393438.2	RUFY1-005	2454	600aa	ENSP00000377087.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34312	Q96T51	NM_001040452.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502434.1	RUFY1-012	984	328aa	ENSP00000426117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000508609.1	RUFY1-009	812	271aa	ENSP00000426701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000502984.1	RUFY1-006	658	219aa	ENSP00000425533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000393448.2	RUFY1-003	2320	324aa	ENSP00000377094.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508797.1	RUFY1-015	1074	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514238.2	RUFY1-011	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503514.1	RUFY1-007	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502531.1	RUFY1-010	1056	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000503583.1	RUFY1-014	854	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507569.1	RUFY1-008	694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509797.1	RUFY1-013	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 984 bps, Translation length: 328 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000502434.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372028 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000502434.1 RUFY1-012

Summary