Transcript: ENST00000575156.1 ERCC4-003

Description

excision repair cross-complementing rodent repair deficiency, complementation group 4 [Source:HGNC Symbol;Acc:3436]

Gene Synonyms

ERCC11, FANCQ, RAD1, XPF

Location

Chromosome 16: 14,014,014-14,027,104 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 6157 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSG00000175595.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311895.7	ERCC4-001	6758	916aa	ENSP00000310520.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32390	B4DXD8 Q92889	NM_005236.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575156.1	ERCC4-003	2073	372aa	ENSP00000459933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A5PKV6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462862.1	ERCC4-002	721	35aa	ENSP00000461322.1	Nonsense mediated decay		I3L4K0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574194.1	ERCC4-007	583	75aa	ENSP00000461883.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574781.1	ERCC4-006	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000389138.3	ERCC4-004	2106	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576348.1	ERCC4-005	604	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573018.1	ERCC4-008	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,073 bps, Translation length: 372 residues

Version

ENST00000575156.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000436400 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000575156.1 ERCC4-003

Summary