Transcript: ENST00000312438.7 CLCF1-002

Description

cardiotrophin-like cytokine factor 1 [Source:HGNC Symbol;Acc:17412]

Gene Synonyms

BSF-3, BSF3, CISS2, CLC, NNT-1, NNT1, NR6

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 4646 variant alleles and maps to 291 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312438.7	CLCF1-002	1844	225aa	ENSP00000309338.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31617	Q9UBD9	NM_013246.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533438.1	CLCF1-001	967	215aa	ENSP00000434122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53666	Q9UBD9	NM_001166212.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528474.1	CLCF1-003	781	215aa	ENSP00000432553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53666	Q9UBD9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,844 bps, Translation length: 225 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBD9

CCDS

This transcript is a member of the Human CCDS set: CCDS31617

Version

ENST00000312438.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395478 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.