Transcript: ENST00000486955.2 CTBP2-012

Description

C-terminal binding protein 2 [Source:HGNC Symbol;Acc:2495]

Gene Synonyms

ribeye

Location

Chromosome 10: 126,686,361-126,691,953 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3122 variant alleles and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSG00000175029.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309035.6	CTBP2-006	3669	985aa	ENSP00000311825.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7644	P56545	NM_022802.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337195.5	CTBP2-001	3404	445aa	ENSP00000338615.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7643	P56545	NM_001329.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334808.6	CTBP2-005	2130	513aa	ENSP00000357816.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SQP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411419.2	CTBP2-011	2036	445aa	ENSP00000410474.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7643	P56545	NM_001083914.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494626.2	CTBP2-002	2014	445aa	ENSP00000436285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7643	P56545	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531469.1	CTBP2-003	1918	445aa	ENSP00000434630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7643	P56545	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530884.1	CTBP2-014	578	3aa	ENSP00000434424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476817.1	CTBP2-010	705	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460976.1	CTBP2-004	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000395705.2	CTBP2-015	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530930.1	CTBP2-013	425	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467395.2	CTBP2-008	410	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493552.1	CTBP2-009	100	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486955.2	CTBP2-012	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 571 bps,

Version

ENST00000486955.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394564 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000486955.2 CTBP2-012

Summary