Transcript: ENST00000508122.1 GALNTL6-005

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6 [Source:HGNC Symbol;Acc:33844]

Gene Synonyms

GALNACT20, GALNT17

Location

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 416286 variant alleles and maps to 327 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000506823.1	GALNTL6-001	3922	601aa	ENSP00000423313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34104	E5D8G0 Q49A17	NM_001034845.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511251.1	GALNTL6-002	2905	61aa	ENSP00000425590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508122.1	GALNTL6-005	1755	584aa	ENSP00000423827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q49A17	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457021.1	GALNTL6-006	3068	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513061.1	GALNTL6-003	1135	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504379.1	GALNTL6-004	929	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,755 bps, Translation length: 584 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q49A17

Version

ENST00000508122.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000362399 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.