Transcript: ENST00000532858.1 SAA1-002

Description

serum amyloid A1 [Source:HGNC Symbol;Acc:10513]

Gene Synonyms

PIG4, SAA, SAA2, TP53I4

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 1902 variant alleles and maps to 414 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405158.2	SAA1-003	675	122aa	ENSP00000384906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7835	E9PQD6 P0DJI8	NM_000331.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356524.4	SAA1-001	615	122aa	ENSP00000348918.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7835	E9PQD6 P0DJI8	NM_199161.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532858.1	SAA1-002	583	122aa	ENSP00000436866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7835	E9PQD6	NM_001178006.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 583 bps, Translation length: 122 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7835

Version

ENST00000532858.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000388079 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.