Transcript: ENST00000310430.6 TNKS-001

Description

tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase [Source:HGNC Symbol;Acc:11941]

Gene Synonyms

ARTD5, PARP-5a, PARP5A, PARPL, TIN1, TINF1, TNKS1, pART5

Location

Chromosome 8: 9,413,424-9,639,856 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 75 domains and features, is associated with 131497 variant alleles and maps to 993 oligo probes.

Gene

This transcript is a product of gene ENSG00000173273.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310430.6	TNKS-001	9620	1327aa	ENSP00000311579.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5974	E7EQ52 O95271 Q59FX0	NM_003747.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518281.1	TNKS-002	3897	1090aa	ENSP00000429890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQ52 Q59FX0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522110.1	TNKS-011	2900	243aa	ENSP00000430920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520408.1	TNKS-003	1964	617aa	ENSP00000428299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DX38 E7EWY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517770.1	TNKS-010	574	61aa	ENSP00000428185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAW5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518635.1	TNKS-008	503	68aa	ENSP00000431098.1	Nonsense mediated decay		O95271	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518027.1	TNKS-007	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519392.1	TNKS-005	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519191.1	TNKS-009	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519930.1	TNKS-006	357	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517652.2	TNKS-012	267	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521039.1	TNKS-004	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000517989.1	TNKS-013	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 9,620 bps, Translation length: 1,327 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95271

CCDS

This transcript is a member of the Human CCDS set: CCDS5974

Version

ENST00000310430.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206935 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310430.6 TNKS-001

Summary