Transcript: ENST00000372027.5 MMRN2-001

Description

multimerin 2 [Source:HGNC Symbol;Acc:19888]

Gene Synonyms

EMILIN-3, EMILIN3, ENDOGLYX-1, EndoGlyx-1, FLJ13465

Location

About this transcript

This transcript has 7 exons, is annotated with 27 domains and features, is associated with 10610 variant alleles and maps to 516 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372027.5	MMRN2-001	4375	949aa	ENSP00000361097.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7379	Q9H8L6 R4GMY6	NM_024756.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000610081.1	MMRN2-011	1020	295aa	ENSP00000477052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMY6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000609457.1	MMRN2-008	890	204aa	ENSP00000476378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474994.2	MMRN2-002	829	123aa	ENSP00000473405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMY6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000608090.1	MMRN2-010	599	109aa	ENSP00000476355.1	Nonsense mediated decay		-	-	-
ENST00000488950.1	MMRN2-003	354	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000608753.1	MMRN2-009	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,375 bps, Translation length: 949 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H8L6

CCDS

This transcript is a member of the Human CCDS set: CCDS7379

Version

ENST00000372027.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049179 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.