Transcript: ENST00000308418.4 RNASEH2C-001

Description

ribonuclease H2, subunit C [Source:HGNC Symbol;Acc:24116]

Gene Synonyms

AGS3, AYP1

Location

Chromosome 11: 65,485,144-65,488,418 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 2118 variant alleles and maps to 415 oligo probes.

Gene

This transcript is a product of gene ENSG00000172922.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308418.4	RNASEH2C-001	2794	164aa	ENSP00000308193.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8111	E9PKP0 Q8TDP1	NM_032193.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528220.1	RNASEH2C-002	1337	81aa	ENSP00000431555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKP0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527610.1	RNASEH2C-005	835	247aa	ENSP00000432897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PN81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531596.1	RNASEH2C-006	968	158aa	ENSP00000435717.1	Nonsense mediated decay		E9PKP0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534482.1	RNASEH2C-008	913	129aa	ENSP00000432081.1	Nonsense mediated decay		E9PKP0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533698.1	RNASEH2C-007	710	124aa	ENSP00000434996.1	Nonsense mediated decay		E9PKP0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530192.1	RNASEH2C-004	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,794 bps, Translation length: 164 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TDP1

CCDS

This transcript is a member of the Human CCDS set: CCDS8111

Version

ENST00000308418.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000390693 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000308418.4 RNASEH2C-001

Summary