Transcript: ENST00000525103.1 ARNT2-007

Description

aryl-hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:16876]

Gene Synonyms

BHLHE1, KIAA0307, bHLHe1

Location

Chromosome 15: 80,733,581-80,845,094 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 45535 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000172379.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303329.4	ARNT2-001	6558	717aa	ENSP00000307479.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32307	H0YKW1 Q9HBZ2	NM_014862.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000533983.1	ARNT2-006	6690	706aa	ENSP00000453651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKW1 Q9HBZ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000527771.1	ARNT2-004	2458	706aa	ENSP00000453792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKW1 Q9HBZ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525103.1	ARNT2-007	585	130aa	ENSP00000452961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKW1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531595.3	ARNT2-008	714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529181.1	ARNT2-002	1145	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525505.1	ARNT2-009	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558849.1	ARNT2-011	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 585 bps, Translation length: 130 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000525103.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000384437 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000525103.1 ARNT2-007

Summary