Transcript: ENST00000462733.1 ATPAF2-003

Description

ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:18802]

Gene Synonyms

ATP12, ATP12p, Atp12p, LP3663, MC5DN1, MGC29736

Location

Chromosome 17: 17,918,373-17,942,389 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 10417 variant alleles and maps to 268 oligo probes.

Gene

This transcript is a product of gene ENSG00000171953.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000474627.3	ATPAF2-001	1564	289aa	ENSP00000417190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32585	C9J2Q2 Q8N5M1	NM_145691.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444058.1	ATPAF2-015	685	205aa	ENSP00000397198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2Q2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585101.1	ATPAF2-013	566	107aa	ENSP00000463861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTB2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581698.1	ATPAF2-014	471	59aa	ENSP00000466008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000462733.1	ATPAF2-003	1737	107aa	ENSP00000463920.1	Nonsense mediated decay		J3KTB2	-	-
ENST00000584205.1	ATPAF2-020	1298	107aa	ENSP00000462899.1	Nonsense mediated decay		J3KTB2	-	-
ENST00000469327.1	ATPAF2-008	681	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577586.1	ATPAF2-012	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496852.1	ATPAF2-004	1662	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465337.2	ATPAF2-009	894	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488753.1	ATPAF2-007	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497871.1	ATPAF2-006	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467560.1	ATPAF2-011	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,737 bps, Translation length: 107 residues

Version

ENST00000462733.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000131936 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000462733.1 ATPAF2-003

Summary