Transcript: ENST00000371953.3 PTEN-001

Description

phosphatase and tensin homolog [Source:HGNC Symbol;Acc:9588]

Gene Synonyms

10q23del, BZS, CWS1, DEC, GLM2, MHAM, MMAC1, PTEN1, TEP1

Location

About this transcript

This transcript has 9 exons, is annotated with 14 domains and features, is associated with 53523 variant alleles and maps to 1013 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371953.3	PTEN-001	9027	403aa	ENSP00000361021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31238	F6KD01 H6WA46 H6WA51 P60484	NM_000314.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000472832.1	PTEN-005	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498703.1	PTEN-004	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487939.1	PTEN-002	477	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462694.1	PTEN-003	383	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 9,027 bps, Translation length: 403 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P60484

CCDS

This transcript is a member of the Human CCDS set: CCDS31238

Version

ENST00000371953.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049241 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.