Transcript: ENST00000306708.6 LRRC8E-001

Description

leucine rich repeat containing 8 family, member E [Source:HGNC Symbol;Acc:26272]

Gene Synonyms

FLJ23420

Location

About this transcript

This transcript has 3 exons, is annotated with 32 domains and features, is associated with 7275 variant alleles and maps to 292 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306708.6	LRRC8E-001	3595	796aa	ENSP00000306524.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12189	M0QZ48 M0R2D8 M0R2K8 M0R3C1 Q6NSJ5	NM_025061.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599367.1	LRRC8E-003	881	137aa	ENSP00000472491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2D8 M0R2K8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000598224.1	LRRC8E-002	760	187aa	ENSP00000470302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZ48 M0R2D8 M0R2K8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593511.1	LRRC8E-005	555	95aa	ENSP00000472642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2K8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000600345.1	LRRC8E-004	531	73aa	ENSP00000473127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R3C1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,595 bps, Translation length: 796 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NSJ5

CCDS

This transcript is a member of the Human CCDS set: CCDS12189

Version

ENST00000306708.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000461354 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.