Transcript: ENST00000424789.2 TANC2-001

Description

tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 [Source:HGNC Symbol;Acc:30212]

Gene Synonyms

DKFZP564D166, FLJ10215, FLJ11824, KIAA1148, KIAA1636, ROLSA, rols

Location

Chromosome 17: 61,086,917-61,505,060 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 49 domains and features, is associated with 170115 variant alleles and maps to 820 oligo probes.

Gene

This transcript is a product of gene ENSG00000170921.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000424789.2	TANC2-001	11721	1990aa	ENSP00000387593.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45754	Q9HCD6	NM_025185.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583356.1	TANC2-004	7841	1254aa	ENSP00000462109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000389520.4	TANC2-005	6404	2000aa	ENSP00000374171.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HCD6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583016.1	TANC2-008	652	135aa	ENSP00000464181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRF0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580068.1	TANC2-006	456	152aa	ENSP00000463062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTM5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000580466.1	TANC2-007	331	111aa	ENSP00000463959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000581424.1	TANC2-010	6999	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583545.1	TANC2-002	3018	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581143.1	TANC2-003	1537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000579541.1	TANC2-009	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 11,721 bps, Translation length: 1,990 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCD6

CCDS

This transcript is a member of the Human CCDS set: CCDS45754

Version

ENST00000424789.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000444765 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000424789.2 TANC2-001

Summary