Transcript: ENST00000507131.1 NFXL1-004

Description

nuclear transcription factor, X-box binding-like 1 [Source:HGNC Symbol;Acc:18726]

Gene Synonyms

CDZFP, HOZFP, OZFP, URCC5

Location

Chromosome 4: 47,850,321-47,916,633 reverse strand.

About this transcript

This transcript has 23 exons, is associated with 27117 variant alleles and maps to 517 oligo probes.

Gene

This transcript is a product of gene ENSG00000170448.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000507489.1	NFXL1-002	3833	911aa	ENSP00000422037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3478	Q6ZNB6	NM_001278624.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381538.3	NFXL1-001	3728	911aa	ENSP00000370949.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3478	Q6ZNB6	NM_152995.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000329043.3	NFXL1-201	2271	733aa	ENSP00000333113.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZNB6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464756.2	NFXL1-003	3865	733aa	ENSP00000425812.1	Nonsense mediated decay		Q6ZNB6	-	-
ENST00000507131.1	NFXL1-004	2664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502448.1	NFXL1-008	1760	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508115.1	NFXL1-007	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511452.1	NFXL1-005	419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 0, Transcript length: 2,664 bps,

Version

ENST00000507131.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361638 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000507131.1 NFXL1-004

Summary