Transcript: ENST00000371842.2 BRD3-004

Description

bromodomain containing 3 [Source:HGNC Symbol;Acc:1104]

Gene Synonyms

KIAA0043, ORFX, RING3L

Location

Chromosome 9: 136,917,555-136,921,134 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 1888 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSG00000169925.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303407.7	BRD3-001	5652	726aa	ENSP00000305918.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6980	A9J571 A9J575 B4DS09 Q15059	NM_007371.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371834.2	BRD3-002	2529	556aa	ENSP00000360900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9J571 A9J575 Q15059	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357885.2	BRD3-201	1810	556aa	ENSP00000350557.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9J571 A9J575 Q15059	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433041.1	BRD3-005	599	20aa	ENSP00000406749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9J575	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000371842.2	BRD3-004	574	74aa	ENSP00000360908.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9J571 A9J575	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473349.1	BRD3-003	761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494743.1	BRD3-006	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 574 bps, Translation length: 74 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000371842.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318420 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000371842.2 BRD3-004

Summary