Transcript: ENST00000467549.1 ROBO1-005

Description

roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:10249]

Gene Synonyms

DUTT1, FLJ21882, SAX3

Location

Chromosome 3: 78,647,961-79,067,694 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 60 domains and features, is associated with 185985 variant alleles and maps to 648 oligo probes.

Gene

This transcript is a product of gene ENSG00000169855.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000436010.2	ROBO1-201	7510	1612aa	ENSP00000406043.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y6N7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464233.1	ROBO1-001	6742	1651aa	ENSP00000420321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54611	Q9Y6N7	NM_002941.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495273.1	ROBO1-003	5600	1606aa	ENSP00000420637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46872	Q2M1J3 Q9Y6N7	NM_133631.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467549.1	ROBO1-005	4841	1551aa	ENSP00000417992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54610	Q9Y6N7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495961.1	ROBO1-010	577	192aa	ENSP00000418553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4Y7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000472273.1	ROBO1-007	569	190aa	ENSP00000418946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000492990.1	ROBO1-011	444	41aa	ENSP00000419915.1	Nonsense mediated decay		F8WEV8	-	-
ENST00000466906.1	ROBO1-009	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498428.1	ROBO1-004	3566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484514.1	ROBO1-006	3236	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488735.1	ROBO1-012	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 4,841 bps, Translation length: 1,551 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6N7

CCDS

This transcript is a member of the Human CCDS set: CCDS54610

Version

ENST00000467549.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352613 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000467549.1 ROBO1-005

Summary